Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCNFP41002 KRT8P20-201ENST00000423953 1409 ntBASIC19.69■□□□□ 0.74
CCNFP41002 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCNFP41002 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCNFP41002 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.69■□□□□ 0.74
CCNFP41002 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNFP41002 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCNFP41002 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNFP41002 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNFP41002 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNFP41002 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCNFP41002 HLA-L-209ENST00000420110 1011 ntBASIC19.69■□□□□ 0.74
CCNFP41002 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCNFP41002 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.69■□□□□ 0.74
CCNFP41002 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNFP41002 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.69■□□□□ 0.74
CCNFP41002 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CCNFP41002 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNFP41002 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCNFP41002 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNFP41002 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNFP41002 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.68■□□□□ 0.74
CCNFP41002 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.68■□□□□ 0.74
CCNFP41002 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.68■□□□□ 0.74
CCNFP41002 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.68■□□□□ 0.74
CCNFP41002 AC142086.2-201ENST00000569753 217 ntBASIC19.68■□□□□ 0.74
CCNFP41002 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.68■□□□□ 0.74
CCNFP41002 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.68■□□□□ 0.74
CCNFP41002 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.68■□□□□ 0.74
CCNFP41002 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CCNFP41002 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.68■□□□□ 0.74
CCNFP41002 LINC01465-201ENST00000408887 1940 ntBASIC19.68■□□□□ 0.74
CCNFP41002 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.68■□□□□ 0.74
CCNFP41002 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCNFP41002 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.68■□□□□ 0.74
CCNFP41002 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
CCNFP41002 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.67■□□□□ 0.74
CCNFP41002 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.67■□□□□ 0.74
CCNFP41002 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.67■□□□□ 0.74
CCNFP41002 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.67■□□□□ 0.74
CCNFP41002 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.67■□□□□ 0.74
CCNFP41002 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CCNFP41002 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.67■□□□□ 0.74
CCNFP41002 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.67■□□□□ 0.74
CCNFP41002 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 DUSP5P2-201ENST00000426873 1033 ntBASIC19.67■□□□□ 0.74
CCNFP41002 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.67■□□□□ 0.74
CCNFP41002 AL138781.1-201ENST00000566567 1274 ntBASIC19.67■□□□□ 0.74
CCNFP41002 AC133041.1-202ENST00000642053 222 ntBASIC19.67■□□□□ 0.74
CCNFP41002 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CCNFP41002 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.67■□□□□ 0.74
CCNFP41002 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCNFP41002 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.67■□□□□ 0.74
CCNFP41002 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.66■□□□□ 0.74
CCNFP41002 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.66■□□□□ 0.74
CCNFP41002 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.66■□□□□ 0.74
CCNFP41002 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCNFP41002 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.66■□□□□ 0.74
CCNFP41002 AC091874.3-201ENST00000512672 1195 ntBASIC19.66■□□□□ 0.74
CCNFP41002 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CCNFP41002 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.66■□□□□ 0.74
CCNFP41002 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CCNFP41002 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.66■□□□□ 0.74
CCNFP41002 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCNFP41002 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms