Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RFC3P40938 TFP1-202ENST00000475455 1573 ntBASIC17.92■□□□□ 0.46
RFC3P40938 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC3P40938 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC3P40938 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RFC3P40938 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.92■□□□□ 0.46
RFC3P40938 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.92■□□□□ 0.46
RFC3P40938 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.92■□□□□ 0.46
RFC3P40938 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.92■□□□□ 0.46
RFC3P40938 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.92■□□□□ 0.46
RFC3P40938 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RFC3P40938 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFC3P40938 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.92■□□□□ 0.46
RFC3P40938 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RFC3P40938 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.92■□□□□ 0.46
RFC3P40938 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RFC3P40938 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC3P40938 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RFC3P40938 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.91■□□□□ 0.46
RFC3P40938 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.91■□□□□ 0.46
RFC3P40938 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC3P40938 LINC01023-201ENST00000606054 436 ntBASIC17.91■□□□□ 0.46
RFC3P40938 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.91■□□□□ 0.46
RFC3P40938 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
RFC3P40938 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RFC3P40938 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RFC3P40938 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC3P40938 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RFC3P40938 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFC3P40938 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC3P40938 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFC3P40938 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RFC3P40938 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.9■□□□□ 0.46
RFC3P40938 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC3P40938 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.9■□□□□ 0.46
RFC3P40938 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.9■□□□□ 0.46
RFC3P40938 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RFC3P40938 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RFC3P40938 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.9■□□□□ 0.46
RFC3P40938 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RFC3P40938 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFC3P40938 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.89■□□□□ 0.46
RFC3P40938 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RFC3P40938 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC3P40938 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC3P40938 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC3P40938 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFC3P40938 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RFC3P40938 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFC3P40938 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
RFC3P40938 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC3P40938 NIFKP9-201ENST00000419265 221 ntBASIC17.89■□□□□ 0.45
RFC3P40938 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC3P40938 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC3P40938 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC3P40938 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC3P40938 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC3P40938 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC3P40938 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.89■□□□□ 0.45
RFC3P40938 AL512408.1-201ENST00000569378 2000 ntBASIC17.89■□□□□ 0.45
RFC3P40938 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RFC3P40938 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RFC3P40938 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
RFC3P40938 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.89■□□□□ 0.45
RFC3P40938 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.88■□□□□ 0.45
RFC3P40938 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.88■□□□□ 0.45
RFC3P40938 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms