Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KRT16P5-201ENST00000455284 522 ntBASIC19.54■□□□□ 0.72
HMGCLP35914 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLP35914 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
HMGCLP35914 AL359736.2-201ENST00000621992 437 ntBASIC19.54■□□□□ 0.72
HMGCLP35914 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLP35914 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HMGCLP35914 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLP35914 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.54■□□□□ 0.72
HMGCLP35914 AL158211.5-201ENST00000623583 2518 ntBASIC19.54■□□□□ 0.72
HMGCLP35914 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCLP35914 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCLP35914 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCLP35914 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HMGCLP35914 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCLP35914 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 KRT8P8-201ENST00000434750 1448 ntBASIC19.53■□□□□ 0.72
HMGCLP35914 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCLP35914 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
HMGCLP35914 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HMGCLP35914 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 TMEM191A-211ENST00000637163 1067 ntBASIC19.53■□□□□ 0.72
HMGCLP35914 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCLP35914 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCLP35914 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCLP35914 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
HMGCLP35914 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCLP35914 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
HMGCLP35914 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HMGCLP35914 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HMGCLP35914 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
HMGCLP35914 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
HMGCLP35914 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
HMGCLP35914 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGCLP35914 AC098590.1-201ENST00000468126 897 ntBASIC19.52■□□□□ 0.72
HMGCLP35914 RNF165-205ENST00000588679 2904 ntBASIC19.52■□□□□ 0.72
HMGCLP35914 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCLP35914 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCLP35914 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HMGCLP35914 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.52■□□□□ 0.71
HMGCLP35914 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.52■□□□□ 0.71
HMGCLP35914 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
HMGCLP35914 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.51■□□□□ 0.71
HMGCLP35914 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
HMGCLP35914 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.51■□□□□ 0.71
HMGCLP35914 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
HMGCLP35914 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 GCSHP5-201ENST00000443090 522 ntBASIC19.51■□□□□ 0.71
HMGCLP35914 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.51■□□□□ 0.71
HMGCLP35914 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCLP35914 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.51■□□□□ 0.71
HMGCLP35914 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
HMGCLP35914 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
HMGCLP35914 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.51■□□□□ 0.71
HMGCLP35914 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
HMGCLP35914 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMGCLP35914 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
HMGCLP35914 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCLP35914 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCLP35914 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.5■□□□□ 0.71
HMGCLP35914 AC142381.4-202ENST00000563973 229 ntBASIC19.5■□□□□ 0.71
HMGCLP35914 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.5■□□□□ 0.71
HMGCLP35914 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.5■□□□□ 0.71
HMGCLP35914 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.5■□□□□ 0.71
HMGCLP35914 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
HMGCLP35914 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
HMGCLP35914 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
HMGCLP35914 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms