Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A5P29400 AC246785.2-201ENST00000432512 513 ntBASIC23.67■■□□□ 1.38
COL4A5P29400 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A5P29400 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.67■■□□□ 1.38
COL4A5P29400 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
COL4A5P29400 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.66■■□□□ 1.38
COL4A5P29400 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL4A5P29400 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL4A5P29400 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.66■■□□□ 1.38
COL4A5P29400 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.66■■□□□ 1.38
COL4A5P29400 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
COL4A5P29400 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL4A5P29400 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
COL4A5P29400 CA15P1-201ENST00000481698 905 ntBASIC23.66■■□□□ 1.38
COL4A5P29400 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC23.66■■□□□ 1.38
COL4A5P29400 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.66■■□□□ 1.38
COL4A5P29400 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.66■■□□□ 1.38
COL4A5P29400 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL4A5P29400 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
COL4A5P29400 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.66■■□□□ 1.38
COL4A5P29400 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
COL4A5P29400 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
COL4A5P29400 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A5P29400 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
COL4A5P29400 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A5P29400 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
COL4A5P29400 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A5P29400 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.65■■□□□ 1.38
COL4A5P29400 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A5P29400 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.65■■□□□ 1.38
COL4A5P29400 CNP-204ENST00000472031 1019 ntTSL 2 BASIC23.65■■□□□ 1.38
COL4A5P29400 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A5P29400 AL136038.3-201ENST00000561909 1096 ntBASIC23.65■■□□□ 1.38
COL4A5P29400 NPAP1P7-201ENST00000613027 823 ntBASIC23.65■■□□□ 1.38
COL4A5P29400 KRT8P41-201ENST00000533985 1514 ntBASIC23.65■■□□□ 1.38
COL4A5P29400 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
COL4A5P29400 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
COL4A5P29400 KRT8P8-201ENST00000434750 1448 ntBASIC23.65■■□□□ 1.38
COL4A5P29400 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.64■■□□□ 1.38
COL4A5P29400 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.64■■□□□ 1.38
COL4A5P29400 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC23.64■■□□□ 1.38
COL4A5P29400 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.64■■□□□ 1.38
COL4A5P29400 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.64■■□□□ 1.38
COL4A5P29400 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.64■■□□□ 1.38
COL4A5P29400 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
COL4A5P29400 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.64■■□□□ 1.37
COL4A5P29400 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC23.64■■□□□ 1.37
COL4A5P29400 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL4A5P29400 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
COL4A5P29400 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
COL4A5P29400 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL4A5P29400 Telomerase-vert.1-201ENST00000363312 438 ntBASIC23.64■■□□□ 1.37
COL4A5P29400 ZNF444P1-201ENST00000559497 298 ntBASIC23.64■■□□□ 1.37
COL4A5P29400 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
COL4A5P29400 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.64■■□□□ 1.37
COL4A5P29400 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.64■■□□□ 1.37
COL4A5P29400 IRF5-214ENST00000613821 595 ntTSL 5 BASIC23.64■■□□□ 1.37
COL4A5P29400 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A5P29400 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A5P29400 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A5P29400 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.63■■□□□ 1.37
COL4A5P29400 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
COL4A5P29400 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
COL4A5P29400 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
COL4A5P29400 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
COL4A5P29400 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A5P29400 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.63■■□□□ 1.37
COL4A5P29400 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.63■■□□□ 1.37
COL4A5P29400 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
COL4A5P29400 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A5P29400 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A5P29400 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A5P29400 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.62■■□□□ 1.37
COL4A5P29400 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.62■■□□□ 1.37
COL4A5P29400 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A5P29400 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.62■■□□□ 1.37
COL4A5P29400 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.62■■□□□ 1.37
COL4A5P29400 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.62■■□□□ 1.37
COL4A5P29400 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
COL4A5P29400 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
COL4A5P29400 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.61■■□□□ 1.37
COL4A5P29400 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.61■■□□□ 1.37
COL4A5P29400 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL4A5P29400 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.61■■□□□ 1.37
COL4A5P29400 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.61■■□□□ 1.37
COL4A5P29400 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL4A5P29400 ATP5G2P1-201ENST00000433580 426 ntBASIC23.61■■□□□ 1.37
COL4A5P29400 CKBP1-201ENST00000565489 1086 ntBASIC23.61■■□□□ 1.37
COL4A5P29400 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC23.61■■□□□ 1.37
COL4A5P29400 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL4A5P29400 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
COL4A5P29400 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
COL4A5P29400 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms