Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.21■□□□□ 0.67
VARSP26640 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.21■□□□□ 0.67
VARSP26640 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.21■□□□□ 0.67
VARSP26640 KRT16P6-202ENST00000425692 1426 ntBASIC19.21■□□□□ 0.67
VARSP26640 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.21■□□□□ 0.67
VARSP26640 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.21■□□□□ 0.67
VARSP26640 RPS2P52-201ENST00000469610 820 ntBASIC19.21■□□□□ 0.67
VARSP26640 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 AC142381.4-202ENST00000563973 229 ntBASIC19.21■□□□□ 0.67
VARSP26640 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.21■□□□□ 0.67
VARSP26640 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
VARSP26640 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
VARSP26640 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.21■□□□□ 0.67
VARSP26640 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.21■□□□□ 0.67
VARSP26640 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.2■□□□□ 0.66
VARSP26640 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.2■□□□□ 0.66
VARSP26640 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.2■□□□□ 0.66
VARSP26640 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.2■□□□□ 0.66
VARSP26640 RPS2P4-201ENST00000476944 856 ntBASIC19.2■□□□□ 0.66
VARSP26640 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.2■□□□□ 0.66
VARSP26640 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
VARSP26640 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.2■□□□□ 0.66
VARSP26640 AC083880.1-201ENST00000608266 535 ntBASIC19.2■□□□□ 0.66
VARSP26640 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
VARSP26640 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.2■□□□□ 0.66
VARSP26640 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
VARSP26640 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
VARSP26640 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VARSP26640 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
VARSP26640 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.19■□□□□ 0.66
VARSP26640 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.19■□□□□ 0.66
VARSP26640 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VARSP26640 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.19■□□□□ 0.66
VARSP26640 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.19■□□□□ 0.66
VARSP26640 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
VARSP26640 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.19■□□□□ 0.66
VARSP26640 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VARSP26640 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VARSP26640 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VARSP26640 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.18■□□□□ 0.66
VARSP26640 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.18■□□□□ 0.66
VARSP26640 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.18■□□□□ 0.66
VARSP26640 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
VARSP26640 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.18■□□□□ 0.66
VARSP26640 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.18■□□□□ 0.66
VARSP26640 AC098590.1-201ENST00000468126 897 ntBASIC19.18■□□□□ 0.66
VARSP26640 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.18■□□□□ 0.66
VARSP26640 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
VARSP26640 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.18■□□□□ 0.66
VARSP26640 AC006058.3-201ENST00000606217 1069 ntBASIC19.18■□□□□ 0.66
VARSP26640 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.18■□□□□ 0.66
VARSP26640 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VARSP26640 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
VARSP26640 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VARSP26640 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.17■□□□□ 0.66
VARSP26640 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VARSP26640 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms