Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL158211.5-201ENST00000623583 2518 ntBASIC21.32■■□□□ 1
RFX1P22670 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.32■■□□□ 1
RFX1P22670 BX088651.1-201ENST00000540551 451 ntBASIC21.32■■□□□ 1
RFX1P22670 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.32■■□□□ 1
RFX1P22670 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.32■■□□□ 1
RFX1P22670 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX1P22670 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.32■■□□□ 1
RFX1P22670 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RFX1P22670 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.32■■□□□ 1
RFX1P22670 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RFX1P22670 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.31■■□□□ 1
RFX1P22670 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.31■■□□□ 1
RFX1P22670 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RFX1P22670 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.31■■□□□ 1
RFX1P22670 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.31■■□□□ 1
RFX1P22670 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFX1P22670 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX1P22670 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
RFX1P22670 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.3■■□□□ 1
RFX1P22670 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX1P22670 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFX1P22670 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RFX1P22670 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RFX1P22670 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.3■■□□□ 1
RFX1P22670 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.3■■□□□ 1
RFX1P22670 AC233263.1-201ENST00000578059 224 ntBASIC21.3■■□□□ 1
RFX1P22670 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RFX1P22670 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX1P22670 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFX1P22670 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFX1P22670 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RFX1P22670 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFX1P22670 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFX1P22670 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RFX1P22670 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.29■■□□□ 1
RFX1P22670 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.29■■□□□ 1
RFX1P22670 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.29■■□□□ 1
RFX1P22670 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.29■■□□□ 1
RFX1P22670 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.29■■□□□ 1
RFX1P22670 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RFX1P22670 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
RFX1P22670 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.29■■□□□ 1
RFX1P22670 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RFX1P22670 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.28■■□□□ 1
RFX1P22670 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.28■■□□□ 1
RFX1P22670 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.28■■□□□ 1
RFX1P22670 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RFX1P22670 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.28■■□□□ 1
RFX1P22670 AL390719.1-204ENST00000412397 1219 ntBASIC21.28■■□□□ 1
RFX1P22670 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RFX1P22670 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.28■■□□□ 1
RFX1P22670 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RFX1P22670 AC005829.2-201ENST00000571422 1056 ntBASIC21.28■■□□□ 1
RFX1P22670 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
RFX1P22670 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX1P22670 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.28■■□□□ 1
RFX1P22670 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.28■■□□□ 1
RFX1P22670 AC116351.2-201ENST00000606540 1585 ntBASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms