Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CCL4P13236 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.53■□□□□ 0.56
CCL4P13236 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.53■□□□□ 0.56
CCL4P13236 AK4P3-201ENST00000418260 669 ntBASIC18.53■□□□□ 0.56
CCL4P13236 KRT8P8-201ENST00000434750 1448 ntBASIC18.53■□□□□ 0.56
CCL4P13236 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.53■□□□□ 0.56
CCL4P13236 BX664615.1-201ENST00000443558 458 ntBASIC18.53■□□□□ 0.56
CCL4P13236 Z85996.1-201ENST00000494644 937 ntBASIC18.53■□□□□ 0.56
CCL4P13236 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.53■□□□□ 0.56
CCL4P13236 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.53■□□□□ 0.56
CCL4P13236 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 AC096733.2-201ENST00000609937 1394 ntBASIC18.53■□□□□ 0.56
CCL4P13236 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.53■□□□□ 0.56
CCL4P13236 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CCL4P13236 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCL4P13236 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CCL4P13236 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CCL4P13236 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.52■□□□□ 0.56
CCL4P13236 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.52■□□□□ 0.56
CCL4P13236 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.52■□□□□ 0.56
CCL4P13236 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CCL4P13236 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.52■□□□□ 0.56
CCL4P13236 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
CCL4P13236 HMGA1P5-201ENST00000412453 271 ntBASIC18.52■□□□□ 0.56
CCL4P13236 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.52■□□□□ 0.56
CCL4P13236 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CCL4P13236 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.52■□□□□ 0.56
CCL4P13236 AC116562.4-202ENST00000641738 218 ntBASIC18.52■□□□□ 0.56
CCL4P13236 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CCL4P13236 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CCL4P13236 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
CCL4P13236 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CCL4P13236 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.52■□□□□ 0.55
CCL4P13236 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CCL4P13236 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CCL4P13236 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.51■□□□□ 0.55
CCL4P13236 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.51■□□□□ 0.55
CCL4P13236 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CCL4P13236 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.51■□□□□ 0.55
CCL4P13236 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CCL4P13236 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CCL4P13236 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.51■□□□□ 0.55
CCL4P13236 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.51■□□□□ 0.55
CCL4P13236 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCL4P13236 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCL4P13236 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.51■□□□□ 0.55
CCL4P13236 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL4P13236 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL4P13236 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CCL4P13236 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
CCL4P13236 AC117947.1-201ENST00000427448 529 ntBASIC18.5■□□□□ 0.55
CCL4P13236 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL4P13236 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.5■□□□□ 0.55
CCL4P13236 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.5■□□□□ 0.55
CCL4P13236 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
CCL4P13236 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CCL4P13236 LINC01465-201ENST00000408887 1940 ntBASIC18.5■□□□□ 0.55
CCL4P13236 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.5■□□□□ 0.55
CCL4P13236 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCL4P13236 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.5■□□□□ 0.55
CCL4P13236 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCL4P13236 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CCL4P13236 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCL4P13236 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms