Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL4AP11441 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.11■□□□□ 0.49
UBL4AP11441 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBL4AP11441 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.11■□□□□ 0.49
UBL4AP11441 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
UBL4AP11441 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL4AP11441 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.1■□□□□ 0.49
UBL4AP11441 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL4AP11441 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBL4AP11441 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
UBL4AP11441 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL4AP11441 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.1■□□□□ 0.49
UBL4AP11441 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL4AP11441 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL4AP11441 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
UBL4AP11441 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.1■□□□□ 0.49
UBL4AP11441 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL4AP11441 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.1■□□□□ 0.49
UBL4AP11441 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.1■□□□□ 0.49
UBL4AP11441 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.1■□□□□ 0.49
UBL4AP11441 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.1■□□□□ 0.49
UBL4AP11441 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.09■□□□□ 0.49
UBL4AP11441 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
UBL4AP11441 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 RPS2P52-201ENST00000469610 820 ntBASIC18.09■□□□□ 0.49
UBL4AP11441 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.09■□□□□ 0.49
UBL4AP11441 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.09■□□□□ 0.49
UBL4AP11441 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UBL4AP11441 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL4AP11441 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBL4AP11441 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.09■□□□□ 0.49
UBL4AP11441 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.09■□□□□ 0.49
UBL4AP11441 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
UBL4AP11441 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.08■□□□□ 0.49
UBL4AP11441 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.08■□□□□ 0.49
UBL4AP11441 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBL4AP11441 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
UBL4AP11441 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.08■□□□□ 0.49
UBL4AP11441 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
UBL4AP11441 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 AC124283.5-201ENST00000624661 1809 ntBASIC18.08■□□□□ 0.48
UBL4AP11441 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.08■□□□□ 0.48
UBL4AP11441 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.08■□□□□ 0.48
UBL4AP11441 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.08■□□□□ 0.48
UBL4AP11441 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.08■□□□□ 0.48
UBL4AP11441 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.08■□□□□ 0.48
UBL4AP11441 AC125437.2-201ENST00000625180 2167 ntBASIC18.08■□□□□ 0.48
UBL4AP11441 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
UBL4AP11441 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
UBL4AP11441 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.08■□□□□ 0.48
UBL4AP11441 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBL4AP11441 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.08■□□□□ 0.48
UBL4AP11441 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UBL4AP11441 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.07■□□□□ 0.48
UBL4AP11441 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.07■□□□□ 0.48
UBL4AP11441 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBL4AP11441 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.07■□□□□ 0.48
UBL4AP11441 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBL4AP11441 RNA5SP413-201ENST00000516373 109 ntBASIC18.07■□□□□ 0.48
UBL4AP11441 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.07■□□□□ 0.48
UBL4AP11441 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.07■□□□□ 0.48
UBL4AP11441 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBL4AP11441 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.07■□□□□ 0.48
UBL4AP11441 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBL4AP11441 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL4AP11441 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms