Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 COPS8-203ENST00000409334 794 ntTSL 5 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 DERL1-203ENST00000419562 918 ntTSL 2 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 AC009947.2-201ENST00000444014 672 ntBASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 TMEM179-206ENST00000616017 1645 ntBASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.03■■□□□ 1.76
CSB-PGBD3P0DP91 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 KRT126P-201ENST00000549467 1181 ntBASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CSB-PGBD3P0DP91 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 TSPY17P-201ENST00000450329 467 ntBASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 AL023803.3-201ENST00000615559 522 ntBASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 AC093458.2-201ENST00000623150 629 ntBASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CSB-PGBD3P0DP91 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 AL121956.5-201ENST00000625261 221 ntBASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 SMG8-203ENST00000578922 2178 ntBASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CSB-PGBD3P0DP91 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 GXYLT1P6-201ENST00000456472 1187 ntBASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 AL359075.1-203ENST00000462729 1002 ntBASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 FAM86EP-206ENST00000510506 987 ntBASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 AL353719.1-201ENST00000566847 864 ntBASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 AC140113.3-201ENST00000605663 199 ntBASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.99■■□□□ 1.75
CSB-PGBD3P0DP91 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 IER3-202ENST00000376377 1350 ntBASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 KRT18P48-201ENST00000434763 852 ntBASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 AL023973.1-201ENST00000624619 620 ntBASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CSB-PGBD3P0DP91 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms