Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 AC099791.2-201ENST00000605725 427 ntBASIC15.66■□□□□ 0.1
SFTA3P0C7M3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 BX119927.1-201ENST00000636596 1552 ntBASIC15.66■□□□□ 0.1
SFTA3P0C7M3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.66■□□□□ 0.1
SFTA3P0C7M3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 AC241377.3-202ENST00000626088 1088 ntBASIC15.65■□□□□ 0.1
SFTA3P0C7M3 AC241585.3-202ENST00000628937 1088 ntBASIC15.65■□□□□ 0.1
SFTA3P0C7M3 AC245100.8-202ENST00000629247 1058 ntBASIC15.65■□□□□ 0.1
SFTA3P0C7M3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SFTA3P0C7M3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SFTA3P0C7M3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 pRNA.6-201ENST00000610482 90 ntBASIC15.64■□□□□ 0.09
SFTA3P0C7M3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 pRNA.5-201ENST00000612139 90 ntBASIC15.64■□□□□ 0.09
SFTA3P0C7M3 pRNA.11-201ENST00000618423 90 ntBASIC15.64■□□□□ 0.09
SFTA3P0C7M3 pRNA.13-201ENST00000619112 90 ntBASIC15.64■□□□□ 0.09
SFTA3P0C7M3 AC124067.4-201ENST00000519691 2379 ntBASIC15.64■□□□□ 0.09
SFTA3P0C7M3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 AC006333.2-201ENST00000607957 2099 ntBASIC15.64■□□□□ 0.09
SFTA3P0C7M3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SFTA3P0C7M3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 SRD5A1P1-201ENST00000442297 786 ntBASIC15.63■□□□□ 0.09
SFTA3P0C7M3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SFTA3P0C7M3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms