Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 FSCN1P1-201ENST00000568912 1481 ntBASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 MIR1238-201ENST00000408483 83 ntBASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 AC010331.1-201ENST00000611423 582 ntBASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RAB40ALP0C0E4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RAB40ALP0C0E4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RAB40ALP0C0E4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 FEM1AP1-201ENST00000431297 1995 ntBASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 NAPSB-206ENST00000562112 1266 ntBASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.45■□□□□ 0.54
RAB40ALP0C0E4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 MIR6786-201ENST00000616843 113 ntBASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 AC131212.4-201ENST00000623606 975 ntBASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RAB40ALP0C0E4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms