Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A2P08572 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A2P08572 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL4A2P08572 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 KRT18P48-201ENST00000434763 852 ntBASIC19.85■□□□□ 0.77
COL4A2P08572 AC092647.4-201ENST00000457211 535 ntBASIC19.85■□□□□ 0.77
COL4A2P08572 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A2P08572 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.85■□□□□ 0.77
COL4A2P08572 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A2P08572 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.85■□□□□ 0.77
COL4A2P08572 AL353719.1-201ENST00000566847 864 ntBASIC19.85■□□□□ 0.77
COL4A2P08572 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A2P08572 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.85■□□□□ 0.77
COL4A2P08572 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL4A2P08572 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL4A2P08572 AL671277.2-201ENST00000458060 996 ntBASIC19.85■□□□□ 0.77
COL4A2P08572 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.85■□□□□ 0.77
COL4A2P08572 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.85■□□□□ 0.77
COL4A2P08572 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.85■□□□□ 0.77
COL4A2P08572 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL4A2P08572 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.84■□□□□ 0.77
COL4A2P08572 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.84■□□□□ 0.77
COL4A2P08572 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL4A2P08572 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL4A2P08572 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
COL4A2P08572 FEM1AP1-201ENST00000431297 1995 ntBASIC19.84■□□□□ 0.77
COL4A2P08572 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL4A2P08572 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
COL4A2P08572 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.84■□□□□ 0.77
COL4A2P08572 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.84■□□□□ 0.77
COL4A2P08572 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.84■□□□□ 0.77
COL4A2P08572 AL160286.2-201ENST00000567150 934 ntBASIC19.84■□□□□ 0.77
COL4A2P08572 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.84■□□□□ 0.77
COL4A2P08572 AC011558.1-201ENST00000623459 338 ntBASIC19.84■□□□□ 0.77
COL4A2P08572 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL4A2P08572 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL4A2P08572 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.84■□□□□ 0.77
COL4A2P08572 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL4A2P08572 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL4A2P08572 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL4A2P08572 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL4A2P08572 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.83■□□□□ 0.77
COL4A2P08572 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.83■□□□□ 0.77
COL4A2P08572 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.83■□□□□ 0.77
COL4A2P08572 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.83■□□□□ 0.77
COL4A2P08572 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.83■□□□□ 0.77
COL4A2P08572 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.83■□□□□ 0.77
COL4A2P08572 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
COL4A2P08572 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
COL4A2P08572 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
COL4A2P08572 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL4A2P08572 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
COL4A2P08572 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.82■□□□□ 0.76
COL4A2P08572 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
COL4A2P08572 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.82■□□□□ 0.76
COL4A2P08572 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.82■□□□□ 0.76
COL4A2P08572 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.82■□□□□ 0.76
COL4A2P08572 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.82■□□□□ 0.76
COL4A2P08572 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.82■□□□□ 0.76
COL4A2P08572 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
COL4A2P08572 AC093458.2-201ENST00000623150 629 ntBASIC19.82■□□□□ 0.76
COL4A2P08572 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.82■□□□□ 0.76
COL4A2P08572 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.82■□□□□ 0.76
COL4A2P08572 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
COL4A2P08572 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.82■□□□□ 0.76
COL4A2P08572 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 AC112907.2-201ENST00000448639 330 ntBASIC19.82■□□□□ 0.76
COL4A2P08572 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL4A2P08572 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.82■□□□□ 0.76
COL4A2P08572 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL4A2P08572 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.82■□□□□ 0.76
COL4A2P08572 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A2P08572 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A2P08572 SMG8-203ENST00000578922 2178 ntBASIC19.81■□□□□ 0.76
COL4A2P08572 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms