Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.78■□□□□ 0.76
RETP07949 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.78■□□□□ 0.76
RETP07949 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.78■□□□□ 0.76
RETP07949 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.78■□□□□ 0.76
RETP07949 AP000550.4-202ENST00000639755 178 ntBASIC19.78■□□□□ 0.76
RETP07949 MYC-208ENST00000641036 567 ntBASIC19.78■□□□□ 0.76
RETP07949 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.78■□□□□ 0.76
RETP07949 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.78■□□□□ 0.76
RETP07949 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.78■□□□□ 0.76
RETP07949 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RETP07949 GABARAPL3-202ENST00000624044 1851 ntBASIC19.77■□□□□ 0.76
RETP07949 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RETP07949 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RETP07949 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RETP07949 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RETP07949 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RETP07949 AC026396.1-201ENST00000419388 421 ntBASIC19.77■□□□□ 0.76
RETP07949 DGCR10-201ENST00000609839 495 ntBASIC19.77■□□□□ 0.76
RETP07949 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.77■□□□□ 0.76
RETP07949 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RETP07949 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.77■□□□□ 0.76
RETP07949 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RETP07949 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RETP07949 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.77■□□□□ 0.76
RETP07949 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RETP07949 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RETP07949 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RETP07949 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
RETP07949 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RETP07949 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RETP07949 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RETP07949 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.76■□□□□ 0.75
RETP07949 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RETP07949 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RETP07949 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.76■□□□□ 0.75
RETP07949 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.76■□□□□ 0.75
RETP07949 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RETP07949 AL031133.1-201ENST00000406807 723 ntBASIC19.76■□□□□ 0.75
RETP07949 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RETP07949 AC026271.3-201ENST00000571884 352 ntBASIC19.76■□□□□ 0.75
RETP07949 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RETP07949 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.76■□□□□ 0.75
RETP07949 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
RETP07949 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.75■□□□□ 0.75
RETP07949 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
RETP07949 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.75■□□□□ 0.75
RETP07949 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.75■□□□□ 0.75
RETP07949 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RETP07949 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.75■□□□□ 0.75
RETP07949 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RETP07949 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.75■□□□□ 0.75
RETP07949 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.75■□□□□ 0.75
RETP07949 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.75■□□□□ 0.75
RETP07949 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.75■□□□□ 0.75
RETP07949 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.75■□□□□ 0.75
RETP07949 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.75■□□□□ 0.75
RETP07949 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.75■□□□□ 0.75
RETP07949 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 AP005212.1-201ENST00000581547 1997 ntBASIC19.75■□□□□ 0.75
RETP07949 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
RETP07949 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RETP07949 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RETP07949 AC006128.1-201ENST00000624704 1661 ntBASIC19.75■□□□□ 0.75
RETP07949 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.74■□□□□ 0.75
RETP07949 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.74■□□□□ 0.75
RETP07949 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.74■□□□□ 0.75
RETP07949 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.74■□□□□ 0.75
RETP07949 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
RETP07949 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.74■□□□□ 0.75
RETP07949 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 RNF152P1-201ENST00000397754 604 ntBASIC19.74■□□□□ 0.75
RETP07949 AC117947.1-201ENST00000427448 529 ntBASIC19.74■□□□□ 0.75
RETP07949 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.74■□□□□ 0.75
RETP07949 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.74■□□□□ 0.75
RETP07949 AC091390.4-202ENST00000476426 537 ntBASIC19.74■□□□□ 0.75
RETP07949 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.74■□□□□ 0.75
RETP07949 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.74■□□□□ 0.75
RETP07949 FAM87A-204ENST00000613235 858 ntBASIC19.74■□□□□ 0.75
RETP07949 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RETP07949 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms