Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CAPN1P07384 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN1P07384 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN1P07384 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CAPN1P07384 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN1P07384 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN1P07384 AL158047.1-201ENST00000445918 881 ntBASIC19.24■□□□□ 0.67
CAPN1P07384 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN1P07384 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.24■□□□□ 0.67
CAPN1P07384 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.24■□□□□ 0.67
CAPN1P07384 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN1P07384 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.24■□□□□ 0.67
CAPN1P07384 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CAPN1P07384 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CAPN1P07384 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CAPN1P07384 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.23■□□□□ 0.67
CAPN1P07384 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.23■□□□□ 0.67
CAPN1P07384 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.23■□□□□ 0.67
CAPN1P07384 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.23■□□□□ 0.67
CAPN1P07384 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.23■□□□□ 0.67
CAPN1P07384 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CAPN1P07384 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CAPN1P07384 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CAPN1P07384 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CAPN1P07384 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.22■□□□□ 0.67
CAPN1P07384 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN1P07384 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN1P07384 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 HLA-G-202ENST00000376815 851 ntBASIC19.22■□□□□ 0.67
CAPN1P07384 HLA-G-203ENST00000376818 1127 ntBASIC19.22■□□□□ 0.67
CAPN1P07384 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.22■□□□□ 0.67
CAPN1P07384 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.22■□□□□ 0.67
CAPN1P07384 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.22■□□□□ 0.67
CAPN1P07384 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 SOX15-203ENST00000570788 1093 ntBASIC19.22■□□□□ 0.67
CAPN1P07384 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.22■□□□□ 0.67
CAPN1P07384 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CAPN1P07384 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN1P07384 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN1P07384 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CAPN1P07384 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CAPN1P07384 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN1P07384 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.21■□□□□ 0.67
CAPN1P07384 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPN1P07384 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CAPN1P07384 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPN1P07384 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPN1P07384 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN1P07384 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN1P07384 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPN1P07384 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms