Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGN1P05114 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HMGN1P05114 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGN1P05114 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.72■□□□□ 0.43
HMGN1P05114 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 CYP2T3P-201ENST00000601990 817 ntBASIC17.72■□□□□ 0.43
HMGN1P05114 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HMGN1P05114 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.72■□□□□ 0.43
HMGN1P05114 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HMGN1P05114 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
HMGN1P05114 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGN1P05114 AC020763.4-201ENST00000623414 4170 ntBASIC17.71■□□□□ 0.43
HMGN1P05114 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMGN1P05114 ZNRF2P3-201ENST00000424200 374 ntBASIC17.71■□□□□ 0.43
HMGN1P05114 AC034268.1-201ENST00000441047 882 ntBASIC17.71■□□□□ 0.43
HMGN1P05114 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.71■□□□□ 0.43
HMGN1P05114 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
HMGN1P05114 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HMGN1P05114 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
HMGN1P05114 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HMGN1P05114 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HMGN1P05114 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.71■□□□□ 0.43
HMGN1P05114 AC068338.2-201ENST00000563278 1430 ntBASIC17.71■□□□□ 0.43
HMGN1P05114 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HMGN1P05114 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
HMGN1P05114 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HMGN1P05114 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGN1P05114 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGN1P05114 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
HMGN1P05114 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HMGN1P05114 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGN1P05114 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGN1P05114 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGN1P05114 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.7■□□□□ 0.42
HMGN1P05114 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGN1P05114 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.7■□□□□ 0.42
HMGN1P05114 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HMGN1P05114 AC069236.1-201ENST00000604339 616 ntBASIC17.7■□□□□ 0.42
HMGN1P05114 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
HMGN1P05114 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGN1P05114 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGN1P05114 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 BCL2-203ENST00000589955 5011 ntBASIC17.7■□□□□ 0.42
HMGN1P05114 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.7■□□□□ 0.42
HMGN1P05114 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HMGN1P05114 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.7■□□□□ 0.42
HMGN1P05114 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGN1P05114 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HMGN1P05114 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.69■□□□□ 0.42
HMGN1P05114 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HMGN1P05114 AC137761.2-201ENST00000561729 223 ntBASIC17.69■□□□□ 0.42
HMGN1P05114 C2orf69P4-201ENST00000565394 541 ntBASIC17.69■□□□□ 0.42
HMGN1P05114 AC145350.3-201ENST00000569033 163 ntBASIC17.69■□□□□ 0.42
HMGN1P05114 AL589743.5-201ENST00000616611 1050 ntBASIC17.69■□□□□ 0.42
HMGN1P05114 AC008694.1-202ENST00000636953 945 ntBASIC17.69■□□□□ 0.42
HMGN1P05114 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
HMGN1P05114 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGN1P05114 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.69■□□□□ 0.42
HMGN1P05114 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
HMGN1P05114 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms