Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
APOBP04114 AP000593.1-201ENST00000393668 712 ntBASIC12.28□□□□□ -0.44
APOBP04114 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.28□□□□□ -0.44
APOBP04114 AP003041.3-201ENST00000527151 707 ntBASIC12.28□□□□□ -0.44
APOBP04114 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.28□□□□□ -0.44
APOBP04114 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC12.28□□□□□ -0.44
APOBP04114 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.28□□□□□ -0.44
APOBP04114 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC12.28□□□□□ -0.44
APOBP04114 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
APOBP04114 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
APOBP04114 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 AC092597.1-201ENST00000487352 616 ntBASIC12.28□□□□□ -0.44
APOBP04114 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.28□□□□□ -0.44
APOBP04114 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
APOBP04114 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 KRT8P41-201ENST00000533985 1514 ntBASIC12.28□□□□□ -0.44
APOBP04114 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC12.28□□□□□ -0.44
APOBP04114 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC12.28□□□□□ -0.44
APOBP04114 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 AC112907.2-201ENST00000448639 330 ntBASIC12.28□□□□□ -0.44
APOBP04114 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
APOBP04114 RNA5SP419-201ENST00000515908 135 ntBASIC12.28□□□□□ -0.44
APOBP04114 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.28□□□□□ -0.44
APOBP04114 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.28□□□□□ -0.44
APOBP04114 AC131212.4-201ENST00000623606 975 ntBASIC12.28□□□□□ -0.44
APOBP04114 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
APOBP04114 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
APOBP04114 AL024507.2-201ENST00000606070 2574 ntBASIC12.27□□□□□ -0.44
APOBP04114 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOBP04114 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC12.27□□□□□ -0.44
APOBP04114 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOBP04114 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOBP04114 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOBP04114 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
APOBP04114 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
APOBP04114 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
APOBP04114 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.44
APOBP04114 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC12.27□□□□□ -0.45
APOBP04114 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.27□□□□□ -0.45
APOBP04114 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 DPP3P2-201ENST00000416030 1696 ntBASIC12.27□□□□□ -0.45
APOBP04114 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.27□□□□□ -0.45
APOBP04114 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
APOBP04114 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC12.27□□□□□ -0.45
APOBP04114 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
APOBP04114 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.27□□□□□ -0.45
APOBP04114 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.27□□□□□ -0.45
APOBP04114 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.27□□□□□ -0.45
APOBP04114 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC12.27□□□□□ -0.45
APOBP04114 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
APOBP04114 Telomerase-vert.1-201ENST00000363312 438 ntBASIC12.27□□□□□ -0.45
APOBP04114 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC12.27□□□□□ -0.45
APOBP04114 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.27□□□□□ -0.45
APOBP04114 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
APOBP04114 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOBP04114 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
APOBP04114 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.26□□□□□ -0.45
APOBP04114 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOBP04114 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.26□□□□□ -0.45
APOBP04114 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.26□□□□□ -0.45
APOBP04114 IFNL4P1-201ENST00000607083 540 ntBASIC12.26□□□□□ -0.45
APOBP04114 AL031432.5-201ENST00000641059 760 ntBASIC12.26□□□□□ -0.45
APOBP04114 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOBP04114 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.26□□□□□ -0.45
APOBP04114 SLC25A6P4-201ENST00000586535 553 ntBASIC12.26□□□□□ -0.45
APOBP04114 FGF14-AS2-201ENST00000606448 1074 ntBASIC12.26□□□□□ -0.45
APOBP04114 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOBP04114 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC12.26□□□□□ -0.45
APOBP04114 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC12.26□□□□□ -0.45
APOBP04114 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.26□□□□□ -0.45
APOBP04114 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOBP04114 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.26□□□□□ -0.45
APOBP04114 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
APOBP04114 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOBP04114 ZNF444P1-201ENST00000559497 298 ntBASIC12.26□□□□□ -0.45
APOBP04114 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOBP04114 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
APOBP04114 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
APOBP04114 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOBP04114 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOBP04114 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOBP04114 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOBP04114 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOBP04114 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.25□□□□□ -0.45
APOBP04114 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC12.25□□□□□ -0.45
APOBP04114 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms