Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC1P02654 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.29■□□□□ 0.36
APOC1P02654 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC1P02654 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC1P02654 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOC1P02654 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC1P02654 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC1P02654 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC1P02654 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.29■□□□□ 0.36
APOC1P02654 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC1P02654 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC1P02654 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC1P02654 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOC1P02654 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.29■□□□□ 0.36
APOC1P02654 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.29■□□□□ 0.36
APOC1P02654 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.28■□□□□ 0.36
APOC1P02654 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.28■□□□□ 0.36
APOC1P02654 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.28■□□□□ 0.36
APOC1P02654 CDCA4P2-201ENST00000441182 718 ntBASIC17.28■□□□□ 0.36
APOC1P02654 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.28■□□□□ 0.36
APOC1P02654 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.28■□□□□ 0.36
APOC1P02654 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
APOC1P02654 AC092437.1-201ENST00000624794 1048 ntBASIC17.28■□□□□ 0.36
APOC1P02654 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
APOC1P02654 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
APOC1P02654 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.28■□□□□ 0.36
APOC1P02654 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.28■□□□□ 0.36
APOC1P02654 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
APOC1P02654 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.28■□□□□ 0.36
APOC1P02654 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
APOC1P02654 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
APOC1P02654 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
APOC1P02654 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 AL390719.1-204ENST00000412397 1219 ntBASIC17.27■□□□□ 0.36
APOC1P02654 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.27■□□□□ 0.36
APOC1P02654 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
APOC1P02654 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.27■□□□□ 0.36
APOC1P02654 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.27■□□□□ 0.36
APOC1P02654 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
APOC1P02654 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
APOC1P02654 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.27■□□□□ 0.35
APOC1P02654 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
APOC1P02654 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
APOC1P02654 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
APOC1P02654 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
APOC1P02654 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.26■□□□□ 0.35
APOC1P02654 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.26■□□□□ 0.35
APOC1P02654 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
APOC1P02654 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
APOC1P02654 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
APOC1P02654 BX276092.2-201ENST00000417668 665 ntBASIC17.26■□□□□ 0.35
APOC1P02654 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.26■□□□□ 0.35
APOC1P02654 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
APOC1P02654 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
APOC1P02654 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
APOC1P02654 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
APOC1P02654 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
APOC1P02654 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms