Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 SUDS3P1-201ENST00000505831 966 ntBASIC16.92■□□□□ 0.3
HLA-DQB1P01920 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB1P01920 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 PRORSD1P-202ENST00000563365 2154 ntBASIC16.91■□□□□ 0.3
HLA-DQB1P01920 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.91■□□□□ 0.3
HLA-DQB1P01920 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB1P01920 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 AC243732.1-201ENST00000612648 864 ntBASIC16.9■□□□□ 0.3
HLA-DQB1P01920 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HLA-DQB1P01920 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQB1P01920 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQB1P01920 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQB1P01920 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQB1P01920 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQB1P01920 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HLA-DQB1P01920 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HLA-DQB1P01920 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms