Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.29■■□□□ 1
TIMP1P01033 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.28■■□□□ 1
TIMP1P01033 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.28■■□□□ 1
TIMP1P01033 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.28■■□□□ 1
TIMP1P01033 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.28■■□□□ 1
TIMP1P01033 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.28■■□□□ 1
TIMP1P01033 HYMAI.1-201ENST00000620949 238 ntBASIC21.28■■□□□ 1
TIMP1P01033 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TIMP1P01033 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.28■■□□□ 1
TIMP1P01033 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.28■■□□□ 1
TIMP1P01033 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.28■■□□□ 1
TIMP1P01033 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.28■■□□□ 1
TIMP1P01033 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.28■■□□□ 1
TIMP1P01033 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.27■■□□□ 1
TIMP1P01033 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 CKBP1-201ENST00000565489 1086 ntBASIC21.27■■□□□ 1
TIMP1P01033 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TIMP1P01033 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
TIMP1P01033 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.27■■□□□ 1
TIMP1P01033 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.27■■□□□ 1
TIMP1P01033 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TIMP1P01033 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TIMP1P01033 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP1P01033 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP1P01033 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 STARP1-201ENST00000397973 869 ntBASIC21.26■□□□□ 0.99
TIMP1P01033 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.26■□□□□ 0.99
TIMP1P01033 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.26■□□□□ 0.99
TIMP1P01033 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TIMP1P01033 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TIMP1P01033 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.26■□□□□ 0.99
TIMP1P01033 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TIMP1P01033 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.25■□□□□ 0.99
TIMP1P01033 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TIMP1P01033 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.25■□□□□ 0.99
TIMP1P01033 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP1P01033 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP1P01033 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP1P01033 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TIMP1P01033 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TIMP1P01033 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.25■□□□□ 0.99
TIMP1P01033 LINC01311-201ENST00000565162 1445 ntBASIC21.25■□□□□ 0.99
TIMP1P01033 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.25■□□□□ 0.99
TIMP1P01033 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.25■□□□□ 0.99
TIMP1P01033 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.24■□□□□ 0.99
TIMP1P01033 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TIMP1P01033 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.24■□□□□ 0.99
TIMP1P01033 NEK4P2-201ENST00000580004 1012 ntBASIC21.24■□□□□ 0.99
TIMP1P01033 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.24■□□□□ 0.99
TIMP1P01033 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TIMP1P01033 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.23■□□□□ 0.99
TIMP1P01033 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
TIMP1P01033 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 FBXW4P1-201ENST00000426721 2239 ntBASIC21.23■□□□□ 0.99
TIMP1P01033 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 AC246785.2-201ENST00000432512 513 ntBASIC21.23■□□□□ 0.99
TIMP1P01033 TSPY21P-201ENST00000433481 731 ntBASIC21.23■□□□□ 0.99
TIMP1P01033 TSPY23P-201ENST00000440136 739 ntBASIC21.23■□□□□ 0.99
TIMP1P01033 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.23■□□□□ 0.99
TIMP1P01033 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.23■□□□□ 0.99
TIMP1P01033 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TIMP1P01033 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms