Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.55■□□□□ 0.88
TRUB2O95900 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.55■□□□□ 0.88
TRUB2O95900 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.55■□□□□ 0.88
TRUB2O95900 AC124016.1-201ENST00000609552 612 ntBASIC20.55■□□□□ 0.88
TRUB2O95900 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB2O95900 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRUB2O95900 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRUB2O95900 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.55■□□□□ 0.88
TRUB2O95900 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TRUB2O95900 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRUB2O95900 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.55■□□□□ 0.88
TRUB2O95900 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TRUB2O95900 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.55■□□□□ 0.88
TRUB2O95900 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRUB2O95900 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.55■□□□□ 0.88
TRUB2O95900 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.54■□□□□ 0.88
TRUB2O95900 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 KRASP1-201ENST00000407852 552 ntBASIC20.54■□□□□ 0.88
TRUB2O95900 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRUB2O95900 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TRUB2O95900 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.54■□□□□ 0.88
TRUB2O95900 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 AC142381.4-202ENST00000563973 229 ntBASIC20.54■□□□□ 0.88
TRUB2O95900 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TRUB2O95900 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRUB2O95900 AL359736.2-201ENST00000621992 437 ntBASIC20.54■□□□□ 0.88
TRUB2O95900 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRUB2O95900 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRUB2O95900 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRUB2O95900 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.53■□□□□ 0.88
TRUB2O95900 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRUB2O95900 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.53■□□□□ 0.88
TRUB2O95900 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TRUB2O95900 GCSHP5-201ENST00000443090 522 ntBASIC20.53■□□□□ 0.88
TRUB2O95900 AC133681.1-201ENST00000465482 601 ntBASIC20.53■□□□□ 0.88
TRUB2O95900 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.53■□□□□ 0.88
TRUB2O95900 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.53■□□□□ 0.88
TRUB2O95900 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRUB2O95900 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.53■□□□□ 0.88
TRUB2O95900 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRUB2O95900 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.53■□□□□ 0.88
TRUB2O95900 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.53■□□□□ 0.88
TRUB2O95900 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.53■□□□□ 0.88
TRUB2O95900 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
TRUB2O95900 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRUB2O95900 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.53■□□□□ 0.88
TRUB2O95900 AP006587.1-201ENST00000534129 1502 ntBASIC20.53■□□□□ 0.88
TRUB2O95900 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.53■□□□□ 0.88
TRUB2O95900 AC116562.4-201ENST00000641316 2276 ntBASIC20.52■□□□□ 0.88
TRUB2O95900 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB2O95900 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.52■□□□□ 0.88
TRUB2O95900 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB2O95900 NBPF21P-201ENST00000425093 1451 ntBASIC20.52■□□□□ 0.88
TRUB2O95900 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.52■□□□□ 0.88
TRUB2O95900 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB2O95900 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRUB2O95900 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB2O95900 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB2O95900 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.52■□□□□ 0.88
TRUB2O95900 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.52■□□□□ 0.88
TRUB2O95900 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TRUB2O95900 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRUB2O95900 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.52■□□□□ 0.88
TRUB2O95900 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.52■□□□□ 0.88
TRUB2O95900 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.52■□□□□ 0.88
TRUB2O95900 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.52■□□□□ 0.88
TRUB2O95900 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
TRUB2O95900 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.52■□□□□ 0.88
TRUB2O95900 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRUB2O95900 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRUB2O95900 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRUB2O95900 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.52■□□□□ 0.87
TRUB2O95900 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.52■□□□□ 0.87
TRUB2O95900 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.51■□□□□ 0.87
TRUB2O95900 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRUB2O95900 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
TRUB2O95900 AL158047.1-201ENST00000445918 881 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms