Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CNOT4O95628 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT4O95628 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.39■□□□□ 0.37
CNOT4O95628 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CNOT4O95628 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT4O95628 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CNOT4O95628 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.39■□□□□ 0.37
CNOT4O95628 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.39■□□□□ 0.37
CNOT4O95628 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT4O95628 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT4O95628 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CNOT4O95628 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT4O95628 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 YBX1P10-201ENST00000444752 975 ntBASIC17.38■□□□□ 0.37
CNOT4O95628 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT4O95628 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT4O95628 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT4O95628 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT4O95628 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CNOT4O95628 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CNOT4O95628 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CNOT4O95628 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT4O95628 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 LINC01023-201ENST00000606054 436 ntBASIC17.37■□□□□ 0.37
CNOT4O95628 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CNOT4O95628 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT4O95628 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT4O95628 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT4O95628 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.36■□□□□ 0.37
CNOT4O95628 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT4O95628 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.36■□□□□ 0.37
CNOT4O95628 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CNOT4O95628 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.36■□□□□ 0.37
CNOT4O95628 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CNOT4O95628 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CNOT4O95628 AL512408.1-201ENST00000569378 2000 ntBASIC17.36■□□□□ 0.37
CNOT4O95628 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.36■□□□□ 0.37
CNOT4O95628 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CNOT4O95628 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms