Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF3O95398 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF3O95398 PPIH-202ENST00000372549 327 ntTSL 3 BASIC29.52■■■□□ 2.32
RAPGEF3O95398 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF3O95398 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
RAPGEF3O95398 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RAPGEF3O95398 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
RAPGEF3O95398 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC29.51■■■□□ 2.32
RAPGEF3O95398 DPP3P2-201ENST00000416030 1696 ntBASIC29.51■■■□□ 2.31
RAPGEF3O95398 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF3O95398 HBZP1-201ENST00000354915 429 ntBASIC29.51■■■□□ 2.31
RAPGEF3O95398 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF3O95398 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
RAPGEF3O95398 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC29.51■■■□□ 2.31
RAPGEF3O95398 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC29.51■■■□□ 2.31
RAPGEF3O95398 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC29.51■■■□□ 2.31
RAPGEF3O95398 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC29.51■■■□□ 2.31
RAPGEF3O95398 AC104692.2-201ENST00000603054 253 ntBASIC29.51■■■□□ 2.31
RAPGEF3O95398 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC29.51■■■□□ 2.31
RAPGEF3O95398 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF3O95398 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC29.51■■■□□ 2.31
RAPGEF3O95398 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF3O95398 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF3O95398 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF3O95398 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RAPGEF3O95398 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 NEK4P2-201ENST00000580004 1012 ntBASIC29.5■■■□□ 2.31
RAPGEF3O95398 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 AL031008.1-201ENST00000619963 541 ntBASIC29.5■■■□□ 2.31
RAPGEF3O95398 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC29.5■■■□□ 2.31
RAPGEF3O95398 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RAPGEF3O95398 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF3O95398 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF3O95398 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF3O95398 KRT16P6-202ENST00000425692 1426 ntBASIC29.49■■■□□ 2.31
RAPGEF3O95398 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF3O95398 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF3O95398 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RAPGEF3O95398 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 AL645929.1-201ENST00000420084 975 ntBASIC29.49■■■□□ 2.31
RAPGEF3O95398 AP002383.4-201ENST00000442518 975 ntBASIC29.49■■■□□ 2.31
RAPGEF3O95398 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 EMBP1-201ENST00000458200 901 ntBASIC29.49■■■□□ 2.31
RAPGEF3O95398 GLRB-205ENST00000512619 728 ntTSL 3 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
RAPGEF3O95398 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 AC016734.2-201ENST00000624325 1377 ntBASIC29.48■■■□□ 2.31
RAPGEF3O95398 PHGDH-210ENST00000641115 1638 ntBASIC29.48■■■□□ 2.31
RAPGEF3O95398 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
RAPGEF3O95398 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
RAPGEF3O95398 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
RAPGEF3O95398 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC29.47■■■□□ 2.31
RAPGEF3O95398 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC29.47■■■□□ 2.31
RAPGEF3O95398 TSSC2-201ENST00000450217 709 ntBASIC29.47■■■□□ 2.31
RAPGEF3O95398 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC29.47■■■□□ 2.31
RAPGEF3O95398 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC29.47■■■□□ 2.31
RAPGEF3O95398 IFNL4P1-201ENST00000607083 540 ntBASIC29.47■■■□□ 2.31
RAPGEF3O95398 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RAPGEF3O95398 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC29.47■■■□□ 2.31
RAPGEF3O95398 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
RAPGEF3O95398 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC29.47■■■□□ 2.31
RAPGEF3O95398 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms