Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SEMA3DO95025 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SEMA3DO95025 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.76■□□□□ 0.59
SEMA3DO95025 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEMA3DO95025 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SEMA3DO95025 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.75■□□□□ 0.59
SEMA3DO95025 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SEMA3DO95025 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SEMA3DO95025 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.75■□□□□ 0.59
SEMA3DO95025 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.75■□□□□ 0.59
SEMA3DO95025 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SEMA3DO95025 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.75■□□□□ 0.59
SEMA3DO95025 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.75■□□□□ 0.59
SEMA3DO95025 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 AC120498.8-201ENST00000614275 531 ntBASIC18.75■□□□□ 0.59
SEMA3DO95025 AC087289.5-201ENST00000586076 3175 ntBASIC18.75■□□□□ 0.59
SEMA3DO95025 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SEMA3DO95025 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.75■□□□□ 0.59
SEMA3DO95025 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SEMA3DO95025 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SEMA3DO95025 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SEMA3DO95025 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.74■□□□□ 0.59
SEMA3DO95025 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.74■□□□□ 0.59
SEMA3DO95025 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SEMA3DO95025 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.74■□□□□ 0.59
SEMA3DO95025 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.74■□□□□ 0.59
SEMA3DO95025 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.74■□□□□ 0.59
SEMA3DO95025 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.74■□□□□ 0.59
SEMA3DO95025 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.74■□□□□ 0.59
SEMA3DO95025 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SEMA3DO95025 SOX15-203ENST00000570788 1093 ntBASIC18.74■□□□□ 0.59
SEMA3DO95025 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SEMA3DO95025 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.74■□□□□ 0.59
SEMA3DO95025 AC124283.5-201ENST00000624661 1809 ntBASIC18.74■□□□□ 0.59
SEMA3DO95025 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SEMA3DO95025 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
SEMA3DO95025 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEMA3DO95025 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.73■□□□□ 0.59
SEMA3DO95025 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEMA3DO95025 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEMA3DO95025 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEMA3DO95025 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.73■□□□□ 0.59
SEMA3DO95025 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.73■□□□□ 0.59
SEMA3DO95025 AC008687.6-201ENST00000596318 630 ntBASIC18.73■□□□□ 0.59
SEMA3DO95025 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.73■□□□□ 0.59
SEMA3DO95025 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SEMA3DO95025 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.73■□□□□ 0.59
SEMA3DO95025 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEMA3DO95025 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SEMA3DO95025 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.73■□□□□ 0.59
SEMA3DO95025 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.73■□□□□ 0.59
SEMA3DO95025 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SEMA3DO95025 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SEMA3DO95025 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.72■□□□□ 0.59
SEMA3DO95025 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SEMA3DO95025 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.72■□□□□ 0.59
SEMA3DO95025 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEMA3DO95025 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SEMA3DO95025 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEMA3DO95025 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.72■□□□□ 0.59
SEMA3DO95025 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SEMA3DO95025 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEMA3DO95025 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SEMA3DO95025 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.72■□□□□ 0.59
SEMA3DO95025 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms