Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CLDN11O75508 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN11O75508 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN11O75508 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 AC113410.3-201ENST00000623366 203 ntBASIC20.06■□□□□ 0.8
CLDN11O75508 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN11O75508 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN11O75508 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLDN11O75508 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLDN11O75508 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN11O75508 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLDN11O75508 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 KSR1P1-201ENST00000446298 240 ntBASIC20.05■□□□□ 0.8
CLDN11O75508 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 MIR4497-201ENST00000583208 89 ntBASIC20.05■□□□□ 0.8
CLDN11O75508 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLDN11O75508 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN11O75508 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLDN11O75508 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLDN11O75508 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN11O75508 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN11O75508 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN11O75508 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN11O75508 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN11O75508 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN11O75508 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN11O75508 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CLDN11O75508 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CLDN11O75508 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN11O75508 AL596275.1-201ENST00000423464 877 ntBASIC20.04■□□□□ 0.8
CLDN11O75508 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.04■□□□□ 0.8
CLDN11O75508 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN11O75508 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN11O75508 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN11O75508 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN11O75508 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN11O75508 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN11O75508 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CLDN11O75508 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN11O75508 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN11O75508 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CLDN11O75508 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN11O75508 SNORA78-201ENST00000459373 127 ntBASIC20.03■□□□□ 0.8
CLDN11O75508 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.03■□□□□ 0.8
CLDN11O75508 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.03■□□□□ 0.8
CLDN11O75508 CD177P1-201ENST00000606252 935 ntBASIC20.03■□□□□ 0.8
CLDN11O75508 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN11O75508 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN11O75508 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN11O75508 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN11O75508 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.02■□□□□ 0.8
CLDN11O75508 AL445675.2-201ENST00000620291 557 ntBASIC20.02■□□□□ 0.8
CLDN11O75508 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN11O75508 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN11O75508 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN11O75508 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN11O75508 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.02■□□□□ 0.79
CLDN11O75508 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN11O75508 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN11O75508 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN11O75508 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.02■□□□□ 0.79
CLDN11O75508 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CLDN11O75508 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN11O75508 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN11O75508 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms