Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF254O75437 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF254O75437 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF254O75437 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF254O75437 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF254O75437 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.33■□□□□ 0.37
ZNF254O75437 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF254O75437 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF254O75437 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF254O75437 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ZNF254O75437 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF254O75437 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF254O75437 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF254O75437 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF254O75437 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF254O75437 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF254O75437 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF254O75437 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF254O75437 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF254O75437 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ZNF254O75437 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ZNF254O75437 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF254O75437 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
ZNF254O75437 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF254O75437 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
ZNF254O75437 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF254O75437 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZNF254O75437 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ZNF254O75437 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 AC026271.2-201ENST00000428091 497 ntBASIC17.32■□□□□ 0.36
ZNF254O75437 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF254O75437 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
ZNF254O75437 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ZNF254O75437 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF254O75437 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF254O75437 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ZNF254O75437 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
ZNF254O75437 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF254O75437 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF254O75437 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF254O75437 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
ZNF254O75437 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF254O75437 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
ZNF254O75437 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF254O75437 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF254O75437 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
ZNF254O75437 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF254O75437 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF254O75437 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ZNF254O75437 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF254O75437 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.3■□□□□ 0.36
ZNF254O75437 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF254O75437 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ZNF254O75437 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF254O75437 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.3■□□□□ 0.36
ZNF254O75437 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.3■□□□□ 0.36
ZNF254O75437 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ZNF254O75437 RARRES2P6-201ENST00000567333 442 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms