Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.54■□□□□ 0.24
PDCD6O75340 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.54■□□□□ 0.24
PDCD6O75340 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PDCD6O75340 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.54■□□□□ 0.24
PDCD6O75340 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PDCD6O75340 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.53■□□□□ 0.24
PDCD6O75340 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.53■□□□□ 0.24
PDCD6O75340 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 AC116351.2-201ENST00000606540 1585 ntBASIC16.53■□□□□ 0.24
PDCD6O75340 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.53■□□□□ 0.24
PDCD6O75340 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.53■□□□□ 0.24
PDCD6O75340 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.53■□□□□ 0.24
PDCD6O75340 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PDCD6O75340 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PDCD6O75340 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PDCD6O75340 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.52■□□□□ 0.24
PDCD6O75340 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.52■□□□□ 0.24
PDCD6O75340 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.52■□□□□ 0.24
PDCD6O75340 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.52■□□□□ 0.24
PDCD6O75340 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.52■□□□□ 0.24
PDCD6O75340 AL162430.1-201ENST00000480705 870 ntBASIC16.52■□□□□ 0.24
PDCD6O75340 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.52■□□□□ 0.24
PDCD6O75340 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.52■□□□□ 0.24
PDCD6O75340 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PDCD6O75340 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.52■□□□□ 0.24
PDCD6O75340 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PDCD6O75340 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDCD6O75340 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
PDCD6O75340 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
PDCD6O75340 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PDCD6O75340 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDCD6O75340 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDCD6O75340 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.51■□□□□ 0.23
PDCD6O75340 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PDCD6O75340 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PDCD6O75340 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PDCD6O75340 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.51■□□□□ 0.23
PDCD6O75340 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PDCD6O75340 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.51■□□□□ 0.23
PDCD6O75340 GPX1P1-201ENST00000388829 606 ntBASIC16.51■□□□□ 0.23
PDCD6O75340 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.51■□□□□ 0.23
PDCD6O75340 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 AC133552.2-202ENST00000575694 574 ntBASIC16.51■□□□□ 0.23
PDCD6O75340 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.51■□□□□ 0.23
PDCD6O75340 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PDCD6O75340 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PDCD6O75340 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDCD6O75340 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDCD6O75340 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PDCD6O75340 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDCD6O75340 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.5■□□□□ 0.23
PDCD6O75340 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PDCD6O75340 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms