Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.27■□□□□ 0.52
HCN1O60741 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.27■□□□□ 0.52
HCN1O60741 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
HCN1O60741 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.27■□□□□ 0.52
HCN1O60741 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.27■□□□□ 0.52
HCN1O60741 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.27■□□□□ 0.52
HCN1O60741 RN7SL471P-201ENST00000580476 299 ntBASIC18.27■□□□□ 0.52
HCN1O60741 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.27■□□□□ 0.52
HCN1O60741 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HCN1O60741 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.27■□□□□ 0.52
HCN1O60741 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HCN1O60741 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HCN1O60741 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.27■□□□□ 0.51
HCN1O60741 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HCN1O60741 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.27■□□□□ 0.51
HCN1O60741 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.27■□□□□ 0.51
HCN1O60741 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
HCN1O60741 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.26■□□□□ 0.51
HCN1O60741 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.26■□□□□ 0.51
HCN1O60741 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.26■□□□□ 0.51
HCN1O60741 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
HCN1O60741 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.26■□□□□ 0.51
HCN1O60741 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 AC069544.1-201ENST00000609399 999 ntBASIC18.26■□□□□ 0.51
HCN1O60741 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HCN1O60741 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HCN1O60741 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.26■□□□□ 0.51
HCN1O60741 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.26■□□□□ 0.51
HCN1O60741 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HCN1O60741 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HCN1O60741 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
HCN1O60741 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HCN1O60741 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HCN1O60741 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.25■□□□□ 0.51
HCN1O60741 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HCN1O60741 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HCN1O60741 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.25■□□□□ 0.51
HCN1O60741 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
HCN1O60741 UBE2SP1-201ENST00000450587 669 ntBASIC18.25■□□□□ 0.51
HCN1O60741 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.25■□□□□ 0.51
HCN1O60741 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.25■□□□□ 0.51
HCN1O60741 AL359736.2-201ENST00000621992 437 ntBASIC18.25■□□□□ 0.51
HCN1O60741 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.25■□□□□ 0.51
HCN1O60741 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.25■□□□□ 0.51
HCN1O60741 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
HCN1O60741 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.25■□□□□ 0.51
HCN1O60741 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HCN1O60741 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HCN1O60741 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HCN1O60741 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.24■□□□□ 0.51
HCN1O60741 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms