Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.4■□□□□ 0.7
KLHL41O60662 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.4■□□□□ 0.7
KLHL41O60662 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.4■□□□□ 0.7
KLHL41O60662 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.4■□□□□ 0.7
KLHL41O60662 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
KLHL41O60662 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KLHL41O60662 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KLHL41O60662 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
KLHL41O60662 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KLHL41O60662 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KLHL41O60662 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KLHL41O60662 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.39■□□□□ 0.69
KLHL41O60662 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
KLHL41O60662 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
KLHL41O60662 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.39■□□□□ 0.69
KLHL41O60662 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
KLHL41O60662 RARRES2P4-201ENST00000514074 484 ntBASIC19.39■□□□□ 0.69
KLHL41O60662 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHL41O60662 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.39■□□□□ 0.69
KLHL41O60662 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.39■□□□□ 0.69
KLHL41O60662 AC066615.1-201ENST00000640911 628 ntBASIC19.39■□□□□ 0.69
KLHL41O60662 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KLHL41O60662 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.39■□□□□ 0.69
KLHL41O60662 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KLHL41O60662 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
KLHL41O60662 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.38■□□□□ 0.69
KLHL41O60662 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.38■□□□□ 0.69
KLHL41O60662 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.38■□□□□ 0.69
KLHL41O60662 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.38■□□□□ 0.69
KLHL41O60662 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.38■□□□□ 0.69
KLHL41O60662 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KLHL41O60662 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHL41O60662 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.37■□□□□ 0.69
KLHL41O60662 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 CDV3P1-201ENST00000471403 739 ntBASIC19.37■□□□□ 0.69
KLHL41O60662 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.37■□□□□ 0.69
KLHL41O60662 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
KLHL41O60662 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
KLHL41O60662 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.37■□□□□ 0.69
KLHL41O60662 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHL41O60662 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHL41O60662 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KLHL41O60662 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KLHL41O60662 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.37■□□□□ 0.69
KLHL41O60662 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.36■□□□□ 0.69
KLHL41O60662 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 MIR4651-201ENST00000582622 73 ntBASIC19.36■□□□□ 0.69
KLHL41O60662 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KLHL41O60662 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.36■□□□□ 0.69
KLHL41O60662 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
KLHL41O60662 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.36■□□□□ 0.69
KLHL41O60662 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KLHL41O60662 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.36■□□□□ 0.69
KLHL41O60662 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.35■□□□□ 0.69
KLHL41O60662 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KLHL41O60662 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
KLHL41O60662 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms