Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TSPAN3O60637 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.21■□□□□ 0.83
TSPAN3O60637 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 AL355355.2-201ENST00000442321 338 ntBASIC20.21■□□□□ 0.83
TSPAN3O60637 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.21■□□□□ 0.83
TSPAN3O60637 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.21■□□□□ 0.83
TSPAN3O60637 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.21■□□□□ 0.83
TSPAN3O60637 AIRN-201ENST00000601203 4374 ntBASIC20.21■□□□□ 0.83
TSPAN3O60637 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TSPAN3O60637 AP001271.2-201ENST00000624018 1556 ntBASIC20.21■□□□□ 0.83
TSPAN3O60637 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.2■□□□□ 0.82
TSPAN3O60637 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TSPAN3O60637 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.2■□□□□ 0.82
TSPAN3O60637 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.2■□□□□ 0.82
TSPAN3O60637 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.2■□□□□ 0.82
TSPAN3O60637 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.2■□□□□ 0.82
TSPAN3O60637 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.2■□□□□ 0.82
TSPAN3O60637 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.2■□□□□ 0.82
TSPAN3O60637 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.2■□□□□ 0.82
TSPAN3O60637 AL355075.4-201ENST00000554988 638 ntBASIC20.2■□□□□ 0.82
TSPAN3O60637 C1QL1P1-201ENST00000568105 661 ntBASIC20.2■□□□□ 0.82
TSPAN3O60637 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TSPAN3O60637 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TSPAN3O60637 TMEM179-206ENST00000616017 1645 ntBASIC20.2■□□□□ 0.82
TSPAN3O60637 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.19■□□□□ 0.82
TSPAN3O60637 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TSPAN3O60637 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN3O60637 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.19■□□□□ 0.82
TSPAN3O60637 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TSPAN3O60637 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN3O60637 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
TSPAN3O60637 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN3O60637 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.19■□□□□ 0.82
TSPAN3O60637 NIFKP9-201ENST00000419265 221 ntBASIC20.19■□□□□ 0.82
TSPAN3O60637 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.19■□□□□ 0.82
TSPAN3O60637 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.19■□□□□ 0.82
TSPAN3O60637 AP003071.4-201ENST00000562276 1284 ntBASIC20.19■□□□□ 0.82
TSPAN3O60637 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN3O60637 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN3O60637 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.19■□□□□ 0.82
TSPAN3O60637 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.19■□□□□ 0.82
TSPAN3O60637 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN3O60637 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TSPAN3O60637 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.18■□□□□ 0.82
TSPAN3O60637 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.18■□□□□ 0.82
TSPAN3O60637 PCDHAC2-203ENST00000615316 3011 ntBASIC20.18■□□□□ 0.82
TSPAN3O60637 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.18■□□□□ 0.82
TSPAN3O60637 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.18■□□□□ 0.82
TSPAN3O60637 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.18■□□□□ 0.82
TSPAN3O60637 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TSPAN3O60637 AL353708.3-201ENST00000610272 989 ntBASIC20.18■□□□□ 0.82
TSPAN3O60637 AC073912.3-201ENST00000624414 853 ntBASIC20.18■□□□□ 0.82
TSPAN3O60637 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TSPAN3O60637 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.18■□□□□ 0.82
TSPAN3O60637 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.18■□□□□ 0.82
TSPAN3O60637 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.18■□□□□ 0.82
TSPAN3O60637 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
TSPAN3O60637 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSPAN3O60637 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TSPAN3O60637 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TSPAN3O60637 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms