Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDH7O60245 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH7O60245 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDH7O60245 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 RPS2P52-201ENST00000469610 820 ntBASIC18.7■□□□□ 0.58
PCDH7O60245 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDH7O60245 PNMA6B-201ENST00000538162 1200 ntBASIC18.7■□□□□ 0.58
PCDH7O60245 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 AC104771.1-201ENST00000603335 964 ntBASIC18.7■□□□□ 0.58
PCDH7O60245 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDH7O60245 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDH7O60245 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH7O60245 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH7O60245 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH7O60245 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 AC069152.1-201ENST00000438030 544 ntBASIC18.69■□□□□ 0.58
PCDH7O60245 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH7O60245 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH7O60245 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH7O60245 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH7O60245 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDH7O60245 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDH7O60245 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH7O60245 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH7O60245 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH7O60245 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH7O60245 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH7O60245 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH7O60245 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH7O60245 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH7O60245 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH7O60245 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.68■□□□□ 0.58
PCDH7O60245 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH7O60245 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDH7O60245 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDH7O60245 AC133041.1-202ENST00000642053 222 ntBASIC18.68■□□□□ 0.58
PCDH7O60245 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDH7O60245 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH7O60245 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH7O60245 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH7O60245 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH7O60245 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PCDH7O60245 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH7O60245 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDH7O60245 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH7O60245 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PCDH7O60245 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH7O60245 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH7O60245 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH7O60245 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDH7O60245 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDH7O60245 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH7O60245 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms