Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.7■□□□□ 0.42
SSX4O60224 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.7■□□□□ 0.42
SSX4O60224 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.7■□□□□ 0.42
SSX4O60224 ITM2C-210ENST00000620962 501 ntBASIC17.7■□□□□ 0.42
SSX4O60224 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.7■□□□□ 0.42
SSX4O60224 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SSX4O60224 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 AC010980.2-201ENST00000587099 1412 ntBASIC17.7■□□□□ 0.42
SSX4O60224 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
SSX4O60224 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SSX4O60224 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX4O60224 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SSX4O60224 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.69■□□□□ 0.42
SSX4O60224 RARRES2P4-201ENST00000514074 484 ntBASIC17.69■□□□□ 0.42
SSX4O60224 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX4O60224 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SSX4O60224 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.69■□□□□ 0.42
SSX4O60224 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.69■□□□□ 0.42
SSX4O60224 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.69■□□□□ 0.42
SSX4O60224 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.69■□□□□ 0.42
SSX4O60224 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSX4O60224 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SSX4O60224 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SSX4O60224 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SSX4O60224 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.68■□□□□ 0.42
SSX4O60224 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SSX4O60224 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
SSX4O60224 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SSX4O60224 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SSX4O60224 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 AC093827.2-201ENST00000512654 315 ntBASIC17.68■□□□□ 0.42
SSX4O60224 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.68■□□□□ 0.42
SSX4O60224 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.68■□□□□ 0.42
SSX4O60224 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 AL162412.1-201ENST00000567129 965 ntBASIC17.68■□□□□ 0.42
SSX4O60224 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.68■□□□□ 0.42
SSX4O60224 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.68■□□□□ 0.42
SSX4O60224 PCDHB18P-201ENST00000524813 2368 ntBASIC17.68■□□□□ 0.42
SSX4O60224 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.68■□□□□ 0.42
SSX4O60224 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SSX4O60224 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SSX4O60224 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SSX4O60224 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.67■□□□□ 0.42
SSX4O60224 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.67■□□□□ 0.42
SSX4O60224 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.67■□□□□ 0.42
SSX4O60224 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.67■□□□□ 0.42
SSX4O60224 AC083880.1-201ENST00000608266 535 ntBASIC17.67■□□□□ 0.42
SSX4O60224 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SSX4O60224 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SSX4O60224 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SSX4O60224 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms