Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SPTLC1O15269 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC1O15269 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21■□□□□ 0.95
SPTLC1O15269 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SPTLC1O15269 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21■□□□□ 0.95
SPTLC1O15269 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21■□□□□ 0.95
SPTLC1O15269 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21■□□□□ 0.95
SPTLC1O15269 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21■□□□□ 0.95
SPTLC1O15269 TUBB8P6-201ENST00000436895 1288 ntBASIC21■□□□□ 0.95
SPTLC1O15269 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SPTLC1O15269 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21■□□□□ 0.95
SPTLC1O15269 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21■□□□□ 0.95
SPTLC1O15269 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SPTLC1O15269 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21■□□□□ 0.95
SPTLC1O15269 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SPTLC1O15269 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPTLC1O15269 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SPTLC1O15269 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 AC009237.14-201ENST00000609975 1594 ntBASIC20.99■□□□□ 0.95
SPTLC1O15269 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC1O15269 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC1O15269 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.99■□□□□ 0.95
SPTLC1O15269 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTLC1O15269 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC1O15269 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.99■□□□□ 0.95
SPTLC1O15269 MIR4785-201ENST00000585005 73 ntBASIC20.99■□□□□ 0.95
SPTLC1O15269 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 AC026471.5-201ENST00000615068 467 ntBASIC20.99■□□□□ 0.95
SPTLC1O15269 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC1O15269 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC1O15269 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.99■□□□□ 0.95
SPTLC1O15269 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SPTLC1O15269 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPTLC1O15269 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC1O15269 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC1O15269 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SPTLC1O15269 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC1O15269 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.98■□□□□ 0.95
SPTLC1O15269 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.98■□□□□ 0.95
SPTLC1O15269 AL355075.4-201ENST00000554988 638 ntBASIC20.98■□□□□ 0.95
SPTLC1O15269 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC1O15269 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC1O15269 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC1O15269 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.98■□□□□ 0.95
SPTLC1O15269 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SPTLC1O15269 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPTLC1O15269 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
SPTLC1O15269 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SPTLC1O15269 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SPTLC1O15269 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.97■□□□□ 0.95
SPTLC1O15269 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.97■□□□□ 0.95
SPTLC1O15269 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.97■□□□□ 0.95
SPTLC1O15269 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.97■□□□□ 0.95
SPTLC1O15269 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.97■□□□□ 0.95
SPTLC1O15269 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 AP003071.4-201ENST00000562276 1284 ntBASIC20.97■□□□□ 0.95
SPTLC1O15269 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.97■□□□□ 0.95
SPTLC1O15269 CR392000.1-201ENST00000624770 1228 ntBASIC20.97■□□□□ 0.95
SPTLC1O15269 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.97■□□□□ 0.95
SPTLC1O15269 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SPTLC1O15269 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SPTLC1O15269 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC1O15269 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC1O15269 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPTLC1O15269 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.96■□□□□ 0.95
SPTLC1O15269 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms