Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3D1O14617 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3D1O14617 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.29■□□□□ 0.52
AP3D1O14617 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3D1O14617 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
AP3D1O14617 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
AP3D1O14617 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.29■□□□□ 0.52
AP3D1O14617 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3D1O14617 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
AP3D1O14617 AC009237.14-201ENST00000609975 1594 ntBASIC18.29■□□□□ 0.52
AP3D1O14617 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3D1O14617 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
AP3D1O14617 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.28■□□□□ 0.52
AP3D1O14617 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3D1O14617 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3D1O14617 AC120498.9-201ENST00000339021 3867 ntBASIC18.27■□□□□ 0.52
AP3D1O14617 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3D1O14617 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3D1O14617 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP3D1O14617 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.27■□□□□ 0.52
AP3D1O14617 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3D1O14617 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3D1O14617 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.27■□□□□ 0.52
AP3D1O14617 MIPEPP3-201ENST00000412105 444 ntBASIC18.27■□□□□ 0.52
AP3D1O14617 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.27■□□□□ 0.52
AP3D1O14617 GUSBP6-202ENST00000438529 1198 ntBASIC18.27■□□□□ 0.52
AP3D1O14617 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP3D1O14617 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.27■□□□□ 0.52
AP3D1O14617 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.27■□□□□ 0.52
AP3D1O14617 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.27■□□□□ 0.52
AP3D1O14617 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.27■□□□□ 0.52
AP3D1O14617 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP3D1O14617 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.27■□□□□ 0.52
AP3D1O14617 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP3D1O14617 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP3D1O14617 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP3D1O14617 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP3D1O14617 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
AP3D1O14617 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
AP3D1O14617 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AP3D1O14617 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.26■□□□□ 0.51
AP3D1O14617 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.26■□□□□ 0.51
AP3D1O14617 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP3D1O14617 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
AP3D1O14617 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.26■□□□□ 0.51
AP3D1O14617 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.26■□□□□ 0.51
AP3D1O14617 NCF1B-203ENST00000435988 1254 ntBASIC18.26■□□□□ 0.51
AP3D1O14617 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.26■□□□□ 0.51
AP3D1O14617 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.26■□□□□ 0.51
AP3D1O14617 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.26■□□□□ 0.51
AP3D1O14617 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.26■□□□□ 0.51
AP3D1O14617 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.26■□□□□ 0.51
AP3D1O14617 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 BX323043.1-201ENST00000641006 1765 ntBASIC18.26■□□□□ 0.51
AP3D1O14617 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP3D1O14617 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 AP001271.2-201ENST00000624018 1556 ntBASIC18.25■□□□□ 0.51
AP3D1O14617 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.25■□□□□ 0.51
AP3D1O14617 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
AP3D1O14617 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.25■□□□□ 0.51
AP3D1O14617 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
AP3D1O14617 TREX1-205ENST00000625293 1783 ntBASIC18.25■□□□□ 0.51
AP3D1O14617 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP3D1O14617 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms