Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.31■□□□□ 0.36
CCL21O00585 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.31■□□□□ 0.36
CCL21O00585 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCL21O00585 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL21O00585 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL21O00585 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL21O00585 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL21O00585 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.3■□□□□ 0.36
CCL21O00585 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.3■□□□□ 0.36
CCL21O00585 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
CCL21O00585 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL21O00585 AC140113.3-201ENST00000605663 199 ntBASIC17.3■□□□□ 0.36
CCL21O00585 AC011558.1-201ENST00000623459 338 ntBASIC17.3■□□□□ 0.36
CCL21O00585 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.3■□□□□ 0.36
CCL21O00585 AL031432.5-201ENST00000641059 760 ntBASIC17.3■□□□□ 0.36
CCL21O00585 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCL21O00585 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL21O00585 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CCL21O00585 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL21O00585 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL21O00585 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCL21O00585 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL21O00585 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL21O00585 AC007225.1-201ENST00000566331 1836 ntBASIC17.29■□□□□ 0.36
CCL21O00585 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.29■□□□□ 0.36
CCL21O00585 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
CCL21O00585 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.29■□□□□ 0.36
CCL21O00585 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.29■□□□□ 0.36
CCL21O00585 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL21O00585 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.29■□□□□ 0.36
CCL21O00585 EP400NL-214ENST00000641289 2402 ntBASIC17.29■□□□□ 0.36
CCL21O00585 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCL21O00585 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 AC092338.2-201ENST00000568827 1415 ntBASIC17.29■□□□□ 0.36
CCL21O00585 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCL21O00585 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCL21O00585 AF106564.1-201ENST00000607058 2553 ntBASIC17.29■□□□□ 0.36
CCL21O00585 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL21O00585 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL21O00585 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CCL21O00585 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL21O00585 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCL21O00585 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL21O00585 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL21O00585 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL21O00585 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCL21O00585 PCED1CP-201ENST00000419887 785 ntBASIC17.28■□□□□ 0.36
CCL21O00585 AC009947.2-201ENST00000444014 672 ntBASIC17.28■□□□□ 0.36
CCL21O00585 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCL21O00585 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.28■□□□□ 0.36
CCL21O00585 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCL21O00585 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL21O00585 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.28■□□□□ 0.36
CCL21O00585 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.28■□□□□ 0.36
CCL21O00585 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.28■□□□□ 0.36
CCL21O00585 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.28■□□□□ 0.36
CCL21O00585 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.28■□□□□ 0.36
CCL21O00585 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCL21O00585 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCL21O00585 TMEM179-206ENST00000616017 1645 ntBASIC17.28■□□□□ 0.36
CCL21O00585 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CCL21O00585 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.28■□□□□ 0.36
CCL21O00585 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL21O00585 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.27■□□□□ 0.36
CCL21O00585 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL21O00585 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCL21O00585 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CCL21O00585 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CCL21O00585 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL21O00585 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCL21O00585 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CCL21O00585 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.27■□□□□ 0.36
CCL21O00585 HOMER2P1-201ENST00000455653 964 ntBASIC17.27■□□□□ 0.36
CCL21O00585 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CCL21O00585 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.27■□□□□ 0.36
CCL21O00585 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.27■□□□□ 0.36
CCL21O00585 KRT126P-201ENST00000549467 1181 ntBASIC17.27■□□□□ 0.36
CCL21O00585 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.27■□□□□ 0.36
CCL21O00585 AC093458.2-201ENST00000623150 629 ntBASIC17.27■□□□□ 0.36
CCL21O00585 AL121956.5-201ENST00000625261 221 ntBASIC17.27■□□□□ 0.36
CCL21O00585 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
CCL21O00585 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.27■□□□□ 0.36
CCL21O00585 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms