Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.79■□□□□ 0.76
AP3B1O00203 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.79■□□□□ 0.76
AP3B1O00203 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
AP3B1O00203 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
AP3B1O00203 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
AP3B1O00203 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3B1O00203 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 AC018445.3-201ENST00000624177 1945 ntBASIC19.78■□□□□ 0.76
AP3B1O00203 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3B1O00203 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3B1O00203 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
AP3B1O00203 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3B1O00203 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3B1O00203 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
AP3B1O00203 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3B1O00203 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3B1O00203 RPS2P52-201ENST00000469610 820 ntBASIC19.78■□□□□ 0.76
AP3B1O00203 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3B1O00203 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.78■□□□□ 0.76
AP3B1O00203 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3B1O00203 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.78■□□□□ 0.76
AP3B1O00203 AL138781.1-201ENST00000566567 1274 ntBASIC19.78■□□□□ 0.76
AP3B1O00203 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
AP3B1O00203 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
AP3B1O00203 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
AP3B1O00203 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
AP3B1O00203 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3B1O00203 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.77■□□□□ 0.76
AP3B1O00203 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.77■□□□□ 0.76
AP3B1O00203 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
AP3B1O00203 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.77■□□□□ 0.76
AP3B1O00203 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3B1O00203 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.77■□□□□ 0.76
AP3B1O00203 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
AP3B1O00203 AC006557.6-201ENST00000623071 864 ntBASIC19.77■□□□□ 0.76
AP3B1O00203 AC133041.1-202ENST00000642053 222 ntBASIC19.77■□□□□ 0.76
AP3B1O00203 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
AP3B1O00203 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3B1O00203 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3B1O00203 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
AP3B1O00203 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3B1O00203 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3B1O00203 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
AP3B1O00203 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3B1O00203 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.76■□□□□ 0.75
AP3B1O00203 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.76■□□□□ 0.75
AP3B1O00203 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
AP3B1O00203 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AP3B1O00203 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
AP3B1O00203 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.76■□□□□ 0.75
AP3B1O00203 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.76■□□□□ 0.75
AP3B1O00203 PNMA6B-201ENST00000538162 1200 ntBASIC19.76■□□□□ 0.75
AP3B1O00203 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3B1O00203 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.76■□□□□ 0.75
AP3B1O00203 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3B1O00203 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
AP3B1O00203 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.75■□□□□ 0.75
AP3B1O00203 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.75■□□□□ 0.75
AP3B1O00203 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3B1O00203 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.75■□□□□ 0.75
AP3B1O00203 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.75■□□□□ 0.75
AP3B1O00203 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.75■□□□□ 0.75
AP3B1O00203 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP3B1O00203 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
AP3B1O00203 AP006587.1-201ENST00000534129 1502 ntBASIC19.75■□□□□ 0.75
AP3B1O00203 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.75■□□□□ 0.75
AP3B1O00203 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP3B1O00203 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.75■□□□□ 0.75
AP3B1O00203 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP3B1O00203 AL032819.2-201ENST00000624543 2162 ntBASIC19.74■□□□□ 0.75
AP3B1O00203 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms