Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM49D1C9J1S8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 CYP2T1P-201ENST00000432607 1285 ntBASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 AC011767.1-201ENST00000617410 1153 ntBASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM49D1C9J1S8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 NEFHP1-201ENST00000412845 2629 ntBASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 C2orf69P4-201ENST00000565394 541 ntBASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM49D1C9J1S8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 AC069236.1-201ENST00000604339 616 ntBASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRIM49D1C9J1S8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM49D1C9J1S8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRIM49D1C9J1S8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM49D1C9J1S8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM49D1C9J1S8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM49D1C9J1S8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 AC016769.1-201ENST00000409132 1010 ntBASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 AC087623.3-201ENST00000607047 1098 ntBASIC19.58■□□□□ 0.72
TRIM49D1C9J1S8 AL589743.5-201ENST00000616611 1050 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms