Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 AL355001.2-201ENST00000620617 1191 ntBASIC13.85□□□□□ -0.19
LINC01546A6NGU7 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC01546A6NGU7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 AC105265.2-201ENST00000467189 838 ntBASIC13.84□□□□□ -0.19
LINC01546A6NGU7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.84□□□□□ -0.19
LINC01546A6NGU7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC01546A6NGU7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01546A6NGU7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01546A6NGU7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.83□□□□□ -0.19
LINC01546A6NGU7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01546A6NGU7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01546A6NGU7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LINC01546A6NGU7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.83□□□□□ -0.19
LINC01546A6NGU7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 RBM17P2-201ENST00000616397 1405 ntBASIC13.83□□□□□ -0.2
LINC01546A6NGU7 AC120498.9-201ENST00000339021 3867 ntBASIC13.83□□□□□ -0.2
LINC01546A6NGU7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 MIR4767-201ENST00000582827 78 ntBASIC13.83□□□□□ -0.2
LINC01546A6NGU7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 SIRPAP1-201ENST00000448467 1770 ntBASIC13.83□□□□□ -0.2
LINC01546A6NGU7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC01546A6NGU7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 MIR572-201ENST00000384983 95 ntBASIC13.82□□□□□ -0.2
LINC01546A6NGU7 SLC7A5P2-201ENST00000553010 536 ntBASIC13.82□□□□□ -0.2
LINC01546A6NGU7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC01546A6NGU7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms