Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 FAM207BP-201ENST00000447172 505 ntBASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 EGLN1P1-201ENST00000531623 762 ntBASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 SLC25A1P4-201ENST00000567977 778 ntBASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 AC096733.2-201ENST00000609937 1394 ntBASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MBD3L4A6NDZ8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 AC005521.1-201ENST00000393351 872 ntBASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 SLC25A3P1-201ENST00000443844 931 ntBASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 AC008040.2-201ENST00000461049 708 ntBASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 AL160286.2-201ENST00000567150 934 ntBASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.24■□□□□ 0.35
MBD3L4A6NDZ8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 AC091390.4-202ENST00000476426 537 ntBASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MBD3L4A6NDZ8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 TERF1P1-201ENST00000311003 1181 ntBASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 AC128688.1-201ENST00000487626 519 ntBASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MBD3L4A6NDZ8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MBD3L4A6NDZ8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms