Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 SLC25A1P4-201ENST00000567977 778 ntBASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 AL590326.2-201ENST00000625139 305 ntBASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TBC1D3BA6NDS4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 TERF1P1-201ENST00000311003 1181 ntBASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 ARMC10P1-201ENST00000313754 855 ntBASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 AC011298.2-201ENST00000617989 482 ntBASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 AC020907.5-201ENST00000624372 1936 ntBASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TBC1D3BA6NDS4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 KRT18P35-201ENST00000510488 1269 ntBASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 RCC2P6-201ENST00000526625 1557 ntBASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.9■□□□□ 0.78
TBC1D3BA6NDS4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 AC004951.3-201ENST00000418645 1148 ntBASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 LIN28AP1-201ENST00000429574 405 ntBASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 KRT8P8-201ENST00000434750 1448 ntBASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 EGLN1P1-201ENST00000531623 762 ntBASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 AP000692.2-201ENST00000608391 879 ntBASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TBC1D3BA6NDS4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 AP001271.2-201ENST00000624018 1556 ntBASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.88■□□□□ 0.77
TBC1D3BA6NDS4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms