Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 AL691432.2-201ENST00000607222 2038 ntBASIC21.12■□□□□ 0.97
CCDC66A2RUB6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 AC087633.2-202ENST00000565166 1439 ntBASIC21.12■□□□□ 0.97
CCDC66A2RUB6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC66A2RUB6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 TMEM179-206ENST00000616017 1645 ntBASIC21.11■□□□□ 0.97
CCDC66A2RUB6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 AL356652.1-201ENST00000615962 565 ntBASIC21.11■□□□□ 0.97
CCDC66A2RUB6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC66A2RUB6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CCDC66A2RUB6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC66A2RUB6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms