Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SSC5DA1L4H1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.96■■□□□ 1.27
SSC5DA1L4H1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SSC5DA1L4H1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SSC5DA1L4H1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
SSC5DA1L4H1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.95■■□□□ 1.27
SSC5DA1L4H1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC22.95■■□□□ 1.27
SSC5DA1L4H1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
SSC5DA1L4H1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 AL450487.1-201ENST00000426799 995 ntBASIC22.95■■□□□ 1.26
SSC5DA1L4H1 CA15P1-201ENST00000481698 905 ntBASIC22.95■■□□□ 1.26
SSC5DA1L4H1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 LINC01465-201ENST00000408887 1940 ntBASIC22.95■■□□□ 1.26
SSC5DA1L4H1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.95■■□□□ 1.26
SSC5DA1L4H1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 KRT8P41-201ENST00000533985 1514 ntBASIC22.94■■□□□ 1.26
SSC5DA1L4H1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SSC5DA1L4H1 SMG8-203ENST00000578922 2178 ntBASIC22.93■■□□□ 1.26
SSC5DA1L4H1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 AC069148.1-201ENST00000608741 768 ntBASIC22.93■■□□□ 1.26
SSC5DA1L4H1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 KRT8P45-201ENST00000414328 1447 ntBASIC22.93■■□□□ 1.26
SSC5DA1L4H1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.93■■□□□ 1.26
SSC5DA1L4H1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 AC012313.10-201ENST00000623509 926 ntBASIC22.92■■□□□ 1.26
SSC5DA1L4H1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 BX119927.1-201ENST00000636596 1552 ntBASIC22.92■■□□□ 1.26
SSC5DA1L4H1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SSC5DA1L4H1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 CKBP1-201ENST00000565489 1086 ntBASIC22.91■■□□□ 1.26
SSC5DA1L4H1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SSC5DA1L4H1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SSC5DA1L4H1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.9■■□□□ 1.26
SSC5DA1L4H1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.9■■□□□ 1.26
SSC5DA1L4H1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.9■■□□□ 1.26
SSC5DA1L4H1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms