Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV25A0A0B4J276 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV25A0A0B4J276 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 AC012618.2-201ENST00000428058 849 ntBASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 AL353708.3-201ENST00000610272 989 ntBASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 KRT8P8-201ENST00000434750 1448 ntBASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV25A0A0B4J276 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV25A0A0B4J276 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms