Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAV4A0A0B4J268 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 MIPEPP3-201ENST00000412105 444 ntBASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 AC083906.2-201ENST00000511578 360 ntBASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 AC125437.2-201ENST00000625180 2167 ntBASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV4A0A0B4J268 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 AC092118.2-201ENST00000613495 667 ntBASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV4A0A0B4J268 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 DUSP5P2-201ENST00000426873 1033 ntBASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 AC073210.2-201ENST00000430369 194 ntBASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV4A0A0B4J268 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms