Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 PKD1P1-201ENST00000458669 6805 ntBASIC13.76□□□□□ -0.21
TRAV12-1A0A0B4J245 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 SERBP1P1-201ENST00000396021 1160 ntBASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 FAM21FP-204ENST00000608637 956 ntBASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAV12-1A0A0B4J245 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 DUX4L19-201ENST00000557448 1267 ntBASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV12-1A0A0B4J245 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV12-1A0A0B4J245 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms