Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 SLC7A5P1-201ENST00000568957 537 ntBASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRAV13-1A0A0B4J241 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
TRAV13-1A0A0B4J241 AC019069.1-201ENST00000610008 1333 ntBASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 AC004854.2-201ENST00000608450 1441 ntBASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 AC123595.1-201ENST00000440769 1046 ntBASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRAV13-1A0A0B4J241 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 AC005837.3-201ENST00000612163 286 ntBASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.63□□□□□ -0.23
TRAV13-1A0A0B4J241 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms