Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 FAM21FP-204ENST00000608637 956 ntBASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC005332.7-201ENST00000614046 2005 ntBASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PGM5P4-201ENST00000421970 445 ntBASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC005181.1-201ENST00000604782 1256 ntBASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CNN2P6-201ENST00000439038 900 ntBASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 AC006970.2-201ENST00000450065 779 ntBASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 OR10C1-204ENST00000622521 1039 ntBASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV8-3A0A0A6YYJ7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms