Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MTDHP1-201ENST00000605323 784 ntBASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FAM197Y4-202ENST00000622692 608 ntBASIC17.85■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 RPS2P4-201ENST00000476944 856 ntBASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 PRKY-204ENST00000533551 1019 ntBASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 AP006587.1-201ENST00000534129 1502 ntBASIC17.83■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.83■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.83■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
TNFSF12-TNFSF13A0A0A6YY99 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AC008550.1-201ENST00000511500 884 ntBASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AFG3L1P-217ENST00000557444 2447 ntBASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AC125437.2-201ENST00000625180 2167 ntBASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.81■□□□□ 0.44
TNFSF12-TNFSF13A0A0A6YY99 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms