Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRBV6-7A0A0A0MS04 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TRBV6-7A0A0A0MS04 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.39■□□□□ 0.22
TRBV6-7A0A0A0MS04 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRBV6-7A0A0A0MS04 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC016769.1-201ENST00000409132 1010 ntBASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 KRT18P5-201ENST00000436075 1291 ntBASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC069236.1-201ENST00000604339 616 ntBASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.39■□□□□ 0.21
TRBV6-7A0A0A0MS04 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 PHGDH-210ENST00000641115 1638 ntBASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC023632.3-201ENST00000521633 145 ntBASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBV6-7A0A0A0MS04 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC006015.1-201ENST00000429970 570 ntBASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 CYP2T1P-201ENST00000432607 1285 ntBASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC011767.1-201ENST00000617410 1153 ntBASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 AC008694.1-202ENST00000636953 945 ntBASIC16.37■□□□□ 0.21
TRBV6-7A0A0A0MS04 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms