Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV5-3A0A0A0MS03 ZNF815P-204ENST00000434898 1737 ntBASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC073210.2-201ENST00000430369 194 ntBASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-3A0A0A0MS03 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC133552.2-202ENST00000575694 574 ntBASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC005181.1-201ENST00000604782 1256 ntBASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-3A0A0A0MS03 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-3A0A0A0MS03 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 LSM12P1-201ENST00000411836 588 ntBASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-3A0A0A0MS03 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-3A0A0A0MS03 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-3A0A0A0MS03 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-3A0A0A0MS03 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-3A0A0A0MS03 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms