Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC187A0A096LP49 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 AC091390.4-202ENST00000476426 537 ntBASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC187A0A096LP49 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC187A0A096LP49 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC187A0A096LP49 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC187A0A096LP49 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
CCDC187A0A096LP49 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 AC092647.4-201ENST00000457211 535 ntBASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 COX11P1-201ENST00000489116 835 ntBASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 MYC-208ENST00000641036 567 ntBASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC187A0A096LP49 AC007375.3-201ENST00000600936 2314 ntBASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 TSPY5P-201ENST00000426936 936 ntBASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 AC007663.1-201ENST00000438948 1240 ntBASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 YBX1P2-201ENST00000489612 999 ntBASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC187A0A096LP49 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 TMEM179-206ENST00000616017 1645 ntBASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 TSPY17P-201ENST00000450329 467 ntBASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 AL512604.3-201ENST00000569583 964 ntBASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC187A0A096LP49 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms